Evaluation of homology-independent CRISPR-Cas9 off-target assessment methods HG Chaudhari, J Penterman, HJ Whitton, SJ Spencer, N Flanagan, ... The CRISPR Journal 3 (6), 440-453, 2020 | 52 | 2020 |
Poor feed efficiency in sheep is associated with several structural abnormalities in the community metabolic network of their ruminal microbes RD Patil, MJ Ellison, SM Wolff, C Shearer, AM Wright, RR Cockrum, ... Journal of Animal Science 96 (6), 2113-2124, 2018 | 25 | 2018 |
Uncovering biomarker genes with enriched classification potential from Hallmark gene sets CA Targonski*, CA Shearer*, BT Shealy, MC Smith, FA Feltus Scientific reports 9 (1), 1-10, 2019 | 24 | 2019 |
Deep generative modeling of the human proteome reveals over a hundred novel genes involved in rare genetic disorders R Orenbuch, AW Kollasch, HD Spinner, CA Shearer, TA Hopf, ... Research Square, rs. 3. rs-3740259, 2024 | 12 | 2024 |
Guidelines for releasing a variant effect predictor BJ Livesey, M Badonyi, M Dias, J Frazer, S Kumar, K Lindorff-Larsen, ... Genome Biology 26 (1), 97, 2025 | 11 | 2025 |
LOL-EVE: Predicting Promoter Variant Effects from Evolutionary Sequences CA Shearer, F Teufel, R Orenbuch, D Ritter, A Spinner, E Xie, J Frazer, ... bioRxiv, 2024.11. 11.623015, 2024 | 1 | 2024 |
A workflow for the systems-level analysis, design, and engineering of genomically recoded organisms A Chiappino-Pepe, L Dratva, CA Shearer, H Tas, JA Marchand, ... 2022 AIChE Annual Meeting, 2022 | | 2022 |
RNAGym: Benchmarks for RNA Fitness and Structure Prediction R Arora, M Angelo, CA Choe, AW Kollasch, F Qu, CA Shearer, ... ICLR 2025 Workshop on Generative and Experimental Perspectives for …, 0 | | |